Biochemistry, UDSC

Publications

SUMMARY OF PUBLICATIONS IN THE LAST FIVE YEARS


Number of Papers published  : 
101    

Number of Books with ISBN :  3

Number of Citation Index – range / average :  Range:  180-1581; Average: 813 per faculty

Number of Impact Factor – range / average  :  Range: Lowest IF = 0.45; Highest IF = 9.6; Average:3.5 per publication

h-index : Range : 12-31; Average : 20 (per faculty)

SNIP :  1.177 

SJR :  1.817

 

PUBLICATIONS


2018

  • Arya, R., Sharma, B., Dhembla, C., Pal, R.K., Patel, A.K., Sundd, M., Ghosh, B., Makde, R.D., Kundu, S.  (2018).  A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.  BBA - Proteins and Proteomics (In press).
  • Bharti H, Singal A, Raza M, Ghosh PC, Nag A.  (2018).  Ionophores as Potent Anti-Malarials: A Miracle in the Making.  Curr Top Med Chem. doi: 10.2174/1568026619666181129125950.
  • Dasauni, P., Mahapatra, M., Saxena, R. and Kundu, S. (2018).  Refractive index of blood is a potential qualitative indicator of hemoglobin disorder in human.  Journal of Proteins and Proteomics, 9(3), 2018, 159-168.
  • Jaisinghania, N., Dawa, S., Singh, K. Nandy, A., Menon, D., Bhandari, P.D., Khare, G., Tyagi, A.K. and Gandotra, S. (2018). Necrosis driven triglyceride synthesis primes macrophages for inflammation during Mycobacterium tuberculosis infection. Frontiers in Immunology. doi: 10.3389/fimmu.2018.01490.
  • Raza, M., Bharti, H., Singal, A., Nag, A.*, Ghosh, P.C.*  (2018).  Long circulatory liposomal maduramicin inhibits the growth of Plasmodium falciparum blood stages in culture and cures murine models of experimental malaria.  Nanoscale.  10(28):13773-13791. doi: 10.1039/c8nr02442a. [I.F. 7.367] (*Corresponding authors).
  • Yadav, U., Arya, R., Kundu S. and Sundd, M.  (2018) “The 'recognition helix' of the type II Acyl Carrier Protein (ACP) utilizes a 'ubiquitin interacting motif (UIM)' like surface to bind its partners”. Biochemistry.  2018 Jun 5. doi: 10.1021/acs.biochem.8b00220. [Epub ahead of print]
  • Kaur, S., Nag, A., Singh, A.K. & Sharma, K.  (2018). PPARγ-targeting potential for radioprotection. Current Drug Targets.  doi: 10.2174/138945011966618013 1105158. [I.F: 3.5].
  • Vaishali Verma, Charanpreet Kaur, Payal Grover, Amita Gupta and Vijay K. Chaudhary (2018). Biotin-tagged proteins: Reagents for efficient ELISA-based serodiagnosis and phage display-based affinity selection. PLoS One 13(1): e0191315.  [I.F. 2.806].
  • Shankar A, Fernandes J.L., Kaur K, Sharma M, Kundu S & Pandey GK. (2018). Rice phytoglobins regulate responses under low mineral nutrients and abiotic stresses in Arabidopsis thaliana. Plant Cell Environ. 41(1):215-230. doi: 10.1111/pce.13081. [I.F. 6.17].
  • Singh, S., Khare, G., Kar,R., Ghosh, P.C., & Tyagi, A. K. (2018). Identification of Mycobacterium tuberculosis BioA inhibitors by using structure based virtual screening. Drug Des Devel Ther,  12, 1065–1079. [I.F. 2.822]
  • Rohilla, A., Khare, G., & Tyagi, A. K. (2018). A combination of docking and cheminformatics approaches for the identification of inhibitors against 4′ phosphopantetheinyl transferase of Mycobacterium tuberculosis. RSC Advances, 8(1), 328-341. [I.F. 3.108]
  • Ahmad, J., Farhana, A., Pancsa, R., Arora, S. K., Srinivasan, A., Tyagi, A. K., & Hasnain, S. E. (2018). Contrasting Function of Structured N-Terminal and Unstructured C-Terminal Segments of Mycobacterium tuberculosis PPE37 Protein. mBio, 9(1), e01712-17. [I.F. 6.956 ]
  • Bahal, R. K., Mathur, S., Chauhan, P., & Tyagi, A. K. (2018). An attenuated quadruple gene mutant of Mycobacterium tuberculosis imparts protection against tuberculosis in guinea pigs. Biology open, 7(1), bio029546. [I.F. 2.09].

2017

  • Sharma, S., Rajendran, V., Kulshreshtha, R., & Ghosh, P.C. (2017). Enhanced Efficacy of anti-miR-191 Delivery through Stearylamine Liposome Formulation for the treatment of Breast Cancer Cells. International Journal of Pharmaceutics, 530, 387-400. ISSN: 0378-5173.
  • Nandi, D., Cheema, P.S., Jaiswal, N., & Nag, A. (2017).  FoxM1: Repurposing an oncogene as a biomarker.  Seminars in Cancer Biology. doi:10.1016/j.semcancer.2017.08.009.   
  • Kumar, P., Achieng, A., Rajendran, V., Ghosh, P.C., Singh, B., Perkins, D., Rawat, M., Kempaiah, P., & Rathi, B. (2017). Synergistic blending of high-valued heterocycles inhibits growth of Plasmodium falciparum in culture and P. berghei infection in mouse model. Scientific Reports, 7(1), 6724. ISSN: 2045- 2322.
  • Sharma, S., Nagpal, N., Ghosh, P.C., & Kulshreshtha, R.  (2017). P53-miR-191-SOX4 regulatory loop affects apoptosis in breast cancer. RNA, 23, 1237-1246. ISSN: 1355-8382 (print), 1469-9001(web).
  • Vandana, N, Haseen, J, Ghosh, P.C., Jain, S., & Boetra, A. (2017).  Liposomes: Drug delivery system or possible doping agent? Journal of Drug Delivery and Therapeutics, 7, 25-29. ISSN: 2250-1177.
  • Zakaria, M.K., Sarkar, D.P., & Chattopadhyay, P. (2017). Induction of Transcriptional Gene Silencing by Expression of shRNA Directed to c-Myc P2 Promoter in Hepatocellular Carcinoma by Tissue-Specific Virosomal Delivery. Methods in Molecular Biology, 1543, 245-257. ISSN: 1064-3745.
  • Mukhi, N., Kundu, S., & Kaur, J. (2017). NO dioxygenase- and peroxidase-like activity of Arabidopsis phytoglobin 3 and its role in Sclerotinia sclerotiorum defense. Nitric Oxide, 68, 150-162.  ISSN: 1089-8603.
  • Punchaichira, T. J., Dey, S. K., Mukhopadhyay, A., Kundu, S., & Thelma, B. K. (2017). Characterization of SNPs in the dopamine-beta-hydroxylase gene providing new insights into its structure-function relationship. Neurogenetics, 18, 155-168. ISSN: 1364-6745 (print), 1364-6753 (online).
  • Sharma, B., Jamdar, S. N., Ghosh, B., Yadav, P., Kumar, A., Kundu, S., Goyal, V. D., & Makde, R. D. (2017). Active site gate of M32 carboxypeptidases illuminated by crystal structure and molecular dynamics simulations. Biochimica et Biophysica Acta-Proteins and Proteomics, 1865, 1406-1415. ISSN: 1570-9639.
  • John, R., Atri, Y., Chand, V., Jaiswal, N., Raj, K., & Nag, A. (2017). Cell Cycle-Dependent Regulation of Cytoglobin by Skp2. FEBS Letters. 591, 3507-3522. ISSN : 0014-5793 (print), 1873-3468 (web).
  • Chowdhury, K., Sharma, A., Kumar, S., Gunjan, G.K., Nag, A., & Mandal CC. (2017). Colocynth Extracts Prevent Epithelial to Mesenchymal Transition and Stemness of Breast Cancer Cells. Frontiers in Pharmacology, 8, 593. ISSN :1663-9812
  • Gupta, A., Venkataraman, B., Vasudevan, M., & GopinathBankar, K. (2017). Co-expression network analysis of toxin-antitoxin loci in Mycobacterium tuberculosis reveals key modulators of cellular stress. Scientific Reports, 7, 5868. ISSN: 2045-2322 (online)
  • Khare, G., Nangpal, P., & Tyagi, A. K. (2017). Differential Roles of Iron Storage Proteins in Maintaining the Iron Homeostasis in Mycobacterium tuberculosis. PLoS One, 12(1), e0169545. ISSN: 1932-6203
  • Rohilla, A., Khare, G., & Tyagi, A. K. (2017). Virtual Screening, pharmacophore development and structure based similarity search to identify inhibitors against IdeR, a transcription factor of Mycobacterium tuberculosis. Scientific Reports, 7, 4653. ISSN: 2045-2322 (online)

 2016

  • Rajendran, V., Hasan, G.M., Kumar, N., Dutt, S., Garg, N., Tiwari, P., & Ghosh, P.C. (2016). Therapeutic efficacy of chloroquine in long circulating liposome formulations against chloroquine-resistant Plasmodium berghei infection in mice. European Journal of Biomedical and Pharmaceutical Sciences, 3, 258-264. ISSN: 2349-8870.
  • Gupta, E., Pachauri, M., Ghosh, P. C., & Rajam, M.V. (2016). Targeting polyamine biosynthetic pathway through RNAi causes the abrogation of MCF 7 breast cancer cell line. Tumour Biology, 37, 1159-1171. ISSN: 1010-4283 (print), 1423-0380 (web)
  • Jha, D., Raza, M., Adak, T., & Ghosh, P. C. (2016). Alteration in Plasmodium falciparum proteome upon treatment with various anti-malarial drugs. Journal of Proteins Proteomics, 7, 1-17. ISSN No. 0975-8151.
  • Rajendran, V., Rohra, S., Raza, M., Hasan, G. M., Dutt, S., & Ghosh, P.C. (2016). Stearylamine liposomal delivery of monensin in combination with free artemisinin eliminates blood stages of plasmodium falciparum in culture and P. berghei infection in murine malaria. Antimicrobial Agents and Chemotherapy, 60, 1304-1318. ISSN: ‎0066-4804 (print), 1098-6596 (web).
  • Uppal, S., Singh, A. K., Arya, R., Tewari, D., Jaiswal, N., Kapoor, A., Bera, A. K., Nag, A., & Kundu, S. (2016). Phe28B10 Induces Channel-Forming Cytotoxic Amyloid Fibrillation in Human Neuroglobin, the Brain-Specific Hemoglobin. Biochemistry, 55, 6832-6847. ISSN : 0006-2960 (print), 1520-4995 (web).
  • Uppal, S., Kumar, A., Shandilya, M., Mukhi, N., Singh, A. K., Kateriya, S., Kaur, J., & Kundu, S. (2016). Penta- and hexa-coordinate ferric hemoglobins display distinct pH titration profiles measured by Soret peak shifts. Analytical Biochemistry, 510, 120-128. ISSN: ‎0003-2697 (print), 1096-0309 (web).
  • Mukhi, N., Dhindwal, S., Uppal, S., Kapoor, A., Arya, R., Kumar, P., Kaur, J., & Kundu, S. (2016). Structural and functional significance of the N- and C-terminal appendages in Arabidopsis truncated hemoglobin. Biochemistry, 55, 1724-1740. ISSN: 0006-2960 (print), 1520-4995 (web).
  • Jebamercy, G., Durai, S., Marudhupandiyan, S., Dasauni, P., Kundu, S., & Balamurugan, K. (2016). Role of DAF-2 in Caenorhabditis elegans immunity against Proteus mirabilis infection. Journal of Proteomics, 145, 81-90. ISSN: 1874-3919.
  • Kumar, V.B., Durai, S., Kundu, S., & Balamurugan, K. (2016). Proteome analysis reveals translational inhibition of Caenorhabditis elegans enhances susceptibility to Pseudomonas aeruginosa PAO1 pathogenesis. Journal of Proteomics, 145, 141-152. ISSN: 1874-3919
  • Singhal, P., Sharma, U, Hussain, S, Nag, A., & Bharadwaj, M. (2016). Identification of genetic variants in TNF receptor 2 which are associated with the development of cervical carcinoma. Biomarkers, 21, 665-672. ISSN: ‎1354-750X (print), 1366-5804 (web).
  • Chand, V., Nandi, D., Mangla, A. G., Sharma, P., & Nag, A. (2016). Tale of a multifaceted co-activator, hADA3: from embryogenesis to cancer and beyond. Open Biology, 6(9) pii: 160153. ISSN: 2046-2441.

2015

  • Sharma, S., Rajmani, R. S., Kumar, A., Bhaskar, A., Singh, A., Manivel, V., Tyagi, A.K., & Rao, K.V. (2015). Differential proteomics approach to identify putative protective antigens of mycobacterium tuberculosis presented during early stages of macrophage infection and their evaluation as DNA vaccines. Indian Journal of Experimental Biology, 53, 429-439. ISSN: 0975-1009 (online), 0019-5189 (print).
  • Singh, A. K., Rathore, S., Tang, Y., Nathan E., Goldfarb, B., Dunn, M., Vinoth, R., Ghosh, P. C., Singh, N., Latha, N., Brajendra, K., Rawat, M., & Rathi, M. (2015). Hydroxyethylamine based phthalimides as new class of plasmepsin hits: design, synthesis and antimalarial evaluation. PLoS One, 10(10), e0139347. ISSN: 1932-6203
  • Pachauri, M., Gupta, E., & Ghosh, P.C. (2015). Piperine loaded PEG-PLGA nanoparticles: preparation, characterization and targeted delivery for adjuvant breast cancer chemotherapy. Journal of Drug Delivery Science Technology, 29, 269–282. ISSN: 1773-2247.
  • Tyagi, N., Tyagi, M., Pachauri, M., & Ghosh, P.C. (2015). Potential therapeutic applications of plant toxin-ricin in cancer: challenges and advances. Tumor Biology, 36, 8239-8246. ISSN: 1010-4283 (print), 1423-0380 (online).
  • Singh, A.K., Rajendran, V., Pant, A., Ghosh, P.C., Singh, N., Lata, N., Garg, S., Pandey, K., Singh, B.K., & Singh, B. (2015). Design, synthesis and biological evaluation of functionalized Phthalimides: A new class of antimalarials and inhibitors of falcipain-2, a major hemoglobinase of malaria parasites. Bioorganic & Medicinal Chemistry, 23, 1817-1827. ISSN: 0968-0896.
  • Kumar, M., Mani, P., Pratheesh, P., Chandra, S., Jeyakkodi, M., Chattopadhyay, P., Sarkar, D.P., & Sinha, S. (2014). Membrane fusion mediated targeted cytosolic drug delivery through scFv engineered Sendai viral envelopes. Current Molecular Medicine, 15, 386-400.ISSN: 1875-5666 (online), 1566-5240 (print).
  • Das, P., Saha, S., Chandra, S., Das, A., Dey, S.K., Das, M.R., Sen, S., Sarkar, D.P., & Jana, S.S. (2015). Phosphorylation of Nonmuscle myosin II-A regulatory light chain resists Sendai virus fusion with host cells. Scientific Reports, 5, 10395. ISSN: 2045-2322.
  • Khan, I., Zakaria, M.K., Kumar, M., Mani, P., Chattopadhyay, P., Sarkar, D.P., & Sinha, S. (2015). A novel placental like alkaline phosphatase promoter driven transcriptional silencing combined with single chain variable fragment based virosomal delivery for neoplastic cell targeting.  Journal of Translational Medicine 13, 254. ISSN: 1479-5876.
  • Yadav, R., Kundu, S., & Sarkar, S. (2015). Drosophila glob1 expresses dynamically and is required for development and oxidative stress response. Genesis, 53, 719-737. ISSN: 1526-954X (print), 1526-968X (web).
  • Kumar, A., Arya, R., Makwana, P., Dangi, R., Yadav, U., Surolia, A., Kundu, S., & Sundd, M. (2015). The structure of the holo-acyl carrier protein of Leishmania major displays a remarkably different phosphopantetheinyl transferase (PPT) binding interface. Biochemistry, 54, 5632-5645. ISSN: 0006-2960 (print), 1520-4995 (web).
  • Sharma, S., Kumar, A., Kundu, S., & Bandhopadhyay, P. (2015). Molecular dynamics simulations indicate that tyrosine B10 limits motions of distal histidine to regulate CO binding in soybean leghemoglobin. Proteins: Structure Function, Bioinformatics, 83, 1836-1848. ISSN: 1097-0134.
  • Singh, K., Shandilya, M., Kundu, S., & Kayastha, A.M. (2015). Heat, acid and chemically induced unfolding pathways, conformational stability and structure-function relationship in wheat alpa–amylase. PLoS One, 10(6), e0129203. ISSN: 1932-6203.
  • Seal, M., Uppal, S., Kundu, S., & Dey, S.G. (2015). Interaction of aponeuroglobin with Heme-Aβ complexes relevant to alzheimer’s disease. Journal of Biological Inorganic Chemistry, 20, 563-574. ISSN: 0949-8257 (print), 1432-1327 (web).
  • Uppal, S., Salhotra, S., Mukhi, N., Zaidi, F.K, Seal, M., Ghosh Dey, S., Bhat, R., & Kundu, S. (2015). Significantly enhanced heme retention ability of myoglobin engineered to mimic the third covalent linkage by non-axial histidine to heme (vinyl) in Synechocystis hemoglobin. Journal of Biological Chemistry, 290, 1979-1993. ISSN: 0021-9258 (print), 1083-351X (web).
  • Jaiswal, N., John, R., Chand, V., & Nag, A. (2015). Oncogenic human papillomavirus16E7 modulates SUMOylation of FoxM1b. The International Journal of Biochemistry & Cell Biology, 58C, 28-38. ISSN: 1357-2725.
  • Kumar, S., Nag, A., & Mandal, C.C. (2015). A comprehensive review on miR-200c, a promising cancer biomarker with therapeutic potential. Current Drug Targets, 16, 1381-1403. ISSN: 1389-4501(print), 1873-5592(web).
  • Singhal, P., Anoop, K., Hussain, S, Nag, A., & Bharadwaj, M. (2015). NFKB1/NFKBI a polymorphisms are associated with the progression of cervical carcinoma in HPV-infected postmenopausal women from rural area. Tumour Biology, 36, 6265-6276. ISSN: 1010-4283 (print), 1423-0380 (web).
  • Kumar, D., Khare, G., Kidwai, S., Tyagi, A. K., Singh, R., & Rawat, D. S. (2015). Novel isoniazid–amidoether derivatives: synthesis, characterization and antimycobacterial activity evaluation. Medicinal Chemistry Communications, 6, 131-137. ISSN: 2040-2503 (print), 2040-2511 (online).

2014

  • Rahman, S. A., Singh, Y., Kohli, S., Ahmad, J., Ehtesham, N. Z., Tyagi, A.K., & Hasnain, S. E.  (2014). Comparative analyses of nonpathogenic, opportunistic, and totally pathogenic mycobacteria reveal genomic and biochemical variabilities and highlight the survival attributes of mycobacterium tuberculosis.  mBio, 5(6), e02020-14. ISSN: 2150-7511 (online).
  • Singh, Y., Kohli, S., Sowpati, D. T., Rahman, S. A., Tyagi, A.K., & Hasnain, S.E.  (2014). Gene cooption in Mycobacteria and search for virulence attributes: comparative proteomic analyses of mycobacterium tuberculosis, mycobacterium indicuspranii and other mycobacteria.  International Journal of Medical Microbiology, 304, 742-748. ISSN: 1438-4221.
  • Puri, R. V., Reddy, P. V., & Tyagi, A.K.  (2014). Apurinic/Apyrimidinic endonucleases of mycobacterium tuberculosis protect against dna damage but are dispensable for the growth of the pathogen in guinea pigs. PloS One, 9(5), e92035. ISSN: 1932-6203.
  • Chaudhary, V. K., Shrivastava, N., Verma, V., Kaur, C., Grover, P., Das, S., & Gupta, A. (2014) Rapid restriction enzyme-free cloning of PCR products: a high-throughput method applicable for library construction. PLoS One, 9(10), e111538. ISSN: 1932-6203.
  • Rana, J., Rajasekharan, S., Gulati, S., Dudha, N., Gupta, A., Chaudhary, V.K., & Gupta, S. (2014). Network mapping among the functional domains of Chikungunya virus nonstructural proteins. Proteins, 82, 2403-11.ISSN: 1572-3887.
  • Gupta, R., Rajendran, V., Ghosh, P.C., & Srivastava, S. (2014). Assessment of anti-plasmodial activity of non-hemolytic, non-immunogenic, non-toxic antimicrobial peptides (AMPs LR14) produced by Lactobacillus plantarum LR/1.  Drugs in R&D, 14, 95-103. ISSN: 1174-5886 (print), 1179-6901 (web).
  • Mahajan, R., Kumar, V., Rajendran, V., Saran, S., Ghosh, P.C., & Saxena, R. (2014). Purification and characterization of a novel and robust L-asparaginase having low glutaminase activity from Bacillus licheniformis: in vitro evaluation of anti-cancerous properties. PLosOne, 9(6), e99037. ISSN: 1932-6203.
  • Zakaria, M. K., Khan, I., Mani, P., Chattopadhyay, P, Sarkar, D.P., & Sinha, S. (2014). Combination of hepatocyte specific delivery and transformation dependent expression of shRNA inducing transcriptional gene silencing of c-Myc promoter in hepatocellular carcinoma cells. Biomedical Central Cancer, 14, 582-588. ISSN:  1471-2407.
  • Zakaria, M.K., Khan, I., Mani, P., Sarkar, D.P., Chattopadhyay, P., Sinha, S. (2014). Epigenetic repression of c-Myc P2 promoter by Sendai F-virosome mediated delivery of tumor specific shRNA in Hepatoma cells. Molecular Biology of Cell, 25, 3987. ISSN: 1939-4586 (online), 1059-1524 (print).
  • Dey, S.K., & Kundu, S. (2014). The Indian Wizard of Biophysics: Remembering G.N. Ramachandran in the International Year of Crystallography. Journal of Proteins and Proteomics, 5, 65-72. ISSN: 0975-8151.   
  • Durai, S., Singh, N., Kundu, S., & Balamurugan, K. (2014). Proteomic investigation of Vibrio alginolyticus challenged Caenorhabditis elegans revealed regulation of cellular homeostatis proteins and their role in supporting innate immune system. Proteomics, 14, 1820-1832. ISSN: 1615-9861.
  • Oshtrakh, M.I., Kumar, A., Alenkina,, I.V., Zakharova, A.P.,  Semionkin, V.A., & Kundu, S. (2014). Characterization of monomeric soybean leghemoglobin using Mössbauer spectroscopy with a high velocity resolution. Hyperfine Interactions, 226, 431-438. ISSN: 0304-3843 (print), 1572-9540 (online). 
  • John, R., Chand, V., Chakraborty, S., Jaiswal, N., & Nag, A. (2014). DNA damage induced activation of Cygb stabilizes p53 and mediates G1 arrest. DNA Repair, 24, 107-112. ISSN: 1568-7864.
  • Chand, V., John, R., Jaiswal, N., Johar, S., & Nag, A. (2014). High risk HPV16E6 stimulates hADA3 degradation by enhancing its SUMOylation. Carcinogenesis, 35, 1830-9. ISSN: 0143-3334 (print), 1460-2180 (web).
  • Chakraborty, S., John, R., & Nag, A. (2014). Cytoglobin in tumor hypoxia: novel insights into cancer suppression. Tumor Biology, 35, 6207-6219. ISSN: 1010-4283 (print), 1423-0380 (web).
  • Jaiswal, N., Chakraborty, S., & Nag, A. (2014). Biology of FOXM1and its emerging role in cancer therapy.  Journal of Proteins and Proteomics, 5, 1-24. ISSN: 0975-8151.
  • Sharma, P., & Nag, A. (2014). CUL4A ubiquitin ligase: a promising drug target for cancer and other human diseases.  Open Biology, 4, 130217. ISSN: 2046-2441.
  • Ranjan, P., Kashyap, R. S., Goel, M., Veetil, S. K., & Kateriya, S. (2014). Cellular organelles facilitate dimerization of a newly identified arf from chlamydomonasreinhardtii. Journal of Phycology, 50, 1137-1145. ISSN: 0022-3646 (print), 1529-8817 (web).
  • Penzkofer, A., Tanwar, M., Veetil, S., Kateriya, S., Stierl, M., & Hegemann, P. (2014). Photo-dynamics of BLUF domain containing adenylyl cyclase NgPAC3 from the amoeboflagellateNaegleriagruberi NEG-M strain. Journal of Photochemistry and Photobiology A: Chemistry, 287, 19-29. ISSN: 1010-6030.
  • Tanwar, M., Stierl, M., Veetil, S. K., Penzkofer, A., Hegemann, P., & Kateriya, S. (2014). Biochemical characterization of photoactivated adenylyl cyclase from Naegleriagruberi. Journal of Proteins and Proteomics, 5, 35-39. ISSN: 0975-8151.
  • Kumar, D., Beena, Khare, G., Kidwai, S., Tyagi, A.K., Singh, R., & Rawat, D. S. (2014). Synthesis of novel 1, 2, 3-triazole derivatives of isoniazid and their in vitro and in vivo antimycobacterial activity evaluation.  European Journal of Medicinal Chemistry, 81, 301-313. ISSN: 0223-5234.

2013

  • Khare, G., Reddy, P. V., Sidhwani, P., & Tyagi, A.K.  (2013). KefB inhibits phagosomal acidification but its role is unrelated to M. tuberculosis survival in host. Scientific Reports, 3, 3527. ISSN: 2045-2322 (online)
  • Khare, G., Kumar, P., & Tyagi, A. K. (2013). Whole-cell screening-based identification of inhibitors against the intraphagosomal survival of Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy, 57(12), 6372-6377. ISSN: 0066-4804 (print), 1098-6596 (online).
  • Chauhan, P., Reddy, P. V., Singh, R., Jaisinghani, N., Gandotra, S., & Tyagi, A. K. (2013). Secretory phosphatases deficient mutant of Mycobacterium tuberculosis imparts protection at the primary site of infection in guinea pigs. PloS One, 8(10), e77930.ISSN: 1932-6203.
  • Puri, R. V., Singh, N., Gupta, R. K., & Tyagi, A. K. (2013). Endonuclease IV Is the major apurinic/apyrimidinic endonuclease in Mycobacterium tuberculosis and is important for protection against oxidative damage. PloS One, 8(8), e71535.ISSN: 1932-6203.
  • Puri, R. V., Reddy, P. V., & Tyagi, A. K. (2013). Secreted acid phosphatase (SapM) of Mycobacterium tuberculosis is indispensable for arresting phagosomal maturation and growth of the pathogen in guinea pig tissues. PloS One, 8(7), e70514. ISSN: 1932-6203.
  • Reddy, P. V., Puri, R. V., Chauhan, P., Kar, R., Rohilla, A., Khera, A., & Tyagi, A. K. (2013). Disruption of mycobactin biosynthesis leads to attenuation of Mycobacterium tuberculosis for growth and virulence. The Journal of Infectious Diseases, 208, 1255-1265. ISSN: 1537-6613 (online), 0022-1899 (print).
  • Chauhan, P., Jain, R., Dey B., & Tyagi, A.K.  (2013). Adjunctive immunotherapy with alpha–crystallin based DNA vaccination reduces tuberculosis chemotherapy period in chronically infected mice. Scientific Reports, 3, 1821.ISSN: 2045-2322 (online).
  • Khare, G., Nangpal, P., & Tyagi, A. K. (2013). Unique residues at the 3-fold and 4-fold axis of mycobacterial ferritin are involved in oligomer switching. Biochemistry, 52(10), 1694-1704. ISSN: 0006-2960 (print), 1520-4995 (online).
  • Dobhal, S., Chaudhary, V. K., Singh, A., Pandey, D., Kumar, A., & Agrawal, S. (2013). Expression of recombinant antibody (single chain antibody fragment) in transgenic plant Nicotianatabacum cv. Xanthi. Molecular Biology Reports, 40, 7027-7037. ISSN: 0301-4851.
  • Gupta, A., Shrivastava, N., Grover, P., Singh, A., Mathur, K., Verma, V., Kaur, C., & Chaudhary, V.K. (2013). A novel helper phage enabling construction of genome-scale ORF-enriched phage display libraries. PLoS One, 8(9), e75212. ISSN: 1932-6203.
  • Goel, D., Rajendran, V., Ghosh, P. C., & Bhatnagar, R. (2013). Cell mediated immune response after challenge in Omp25 liposome immunized mice contributes to protection against virulent Brucella abortus 544. Vaccine, 31, 1231-1237. ISSN: 0264-410X.
  • Tyagi, N., Rathore, S. S., & Ghosh, P. C. (2013). Efficacy of liposomal monensin on the enhancement of the antitumour activity of liposomal ricin in human epidermoid carcinoma (KB) cells. Indian Journal of Pharmaceutical Sciences, 75, 16. ISSN: 0250-474X (print), 1998-3743 (web).
  • Ray, A., Roy, C.L., Kumar, A., Mani, P., Joseph, A.P., Sudha, G., Sarkar, D.P., Srinivasan, N., & Das, S. (2013). Inhibition of the interaction between NS3 protease and HCV IRES with a small peptide: A novel therapeutic strategy. Molecular Therapy, 21, 57-67. ISSN: 1525-0016.
  • Mukhi, N., Dhindwal, S., Uppal, S., Kumar, P., Kaur, J., & Kundu, S. (2013). X-ray crystallographic structural characteristics of Arabidopsis hemoglobin 1 and their functional implications. Biochimica et BiophysicaActa, 1834, 1944-1956. ISSN: 1570-9639.
  • Kumar, P., Patil, D.N., Chaudhary, A., Tomar, S., Yernool, D., Singh, N., Dasauni, P., Kundu, S., & Kumar, P. (2013). Purification and biophysical characterization of 11S globulin from Wrightiatinctoria exhibiting hemagglutinating activity. Protein and Peptide Letters, 20, 499-509. 1875-5305 (online), 0929-8665 (print).
  • Patil, D.N, Datta, M., Dev, A., Dhindwal, S., Singh, N., Dasauni, P., Kundu, S., Sharma, A. K, Tomar, S., & Kumar, P. (2013). Structural investigation of a novel N-acetyl glucosamine binding chi-lectin which reveals evolutionary relationship with class III chitinases. PLoS One, 8(5), e63779. ISSN: 1932-6203.
  • Basireddy, S., Uppal, S., Singh, A.K., & Kundu, S. (2013). An evaluation of potential intrinsically disordered and amyloidogenic regions in hemoglobins.  Journal of Proteins and Proteomics, 4, 231-248. ISSN: 0975-8151..
  • Jangir, D.K., Kundu, S., & Mehrotra, R. (2013). Role of minor groove width and hydration pattern on amsacrine interaction with DNA. PLoS One, 8(7), e69933. ISSN: 1932-6203.
  • Penzkofer, A., Tanwar, M., Veetil, S. K., Kateriya, S., Stierl, M., & Hegemann, P. (2013). Photo-dynamics and thermal behavior of the BLUF domain containing adenylate cyclase NgPAC2 from the amoeboflagellateNaegleriagruberi NEG-M strain. Chemical Physics, 412, 96-108. ISSN: 0301-0104.
  • Sizova, I., Greiner, A., Awasthi, M., Kateriya, S., & Hegemann, P. (2013). Nuclear gene targeting in Chlamydomonas using engineered zinc‐finger nucleases. The Plant Journal, 73(5), 873-882. ISSN: 1365-313X.
  • Penzkofer, A., Tanwar, M., Veetil, S., Kateriya, S., Stierl, M., & Hegemann, P. (2013). Photo-dynamics and thermal behavior of the BLUF domain containing adenylate cyclase NgPAC2 from the amoeboflagellateNaegleriagruberi NEG-M strain. Chemical Physics, 412, 96-108. ISSN: 0301-0104.
  • Penzkofer, A., Tanwar, M., Veetil, S. K., Kateriya, S., Stierl, M., & Hegemann, P. (2013). Photo-dynamics of the lyophilized photo-activated adenylate cyclase NgPAC2 from the amoeboflagellateNaegleriagruberi NEG-M strain. Chemical Physics, 423, 192-201. ISSN: 0301-0104.

2012

  • Jain, R., Dey, B., & Tyagi, A.K.  (2012). Development of the first oligonucleotide microarray for global gene expression profiling in guinea pigs: defining the transcription signature of infectious diseases.  BMC Genomics, 13, 520-530. ISSN: 1471-2164.
  • Saini, V., Raghuvanshi, S., Khurana, J. P., Ahmed, N., Hasnain, S. E., Tyagi, A. K., & Tyagi, A.K.  (2012). Massive gene acquisitions in mycobacterium indicuspranii provide a perspective on mycobacterial evolution.  Nucleic Acids Research, 40, 10832-10850. ISSN: 1362-4962 (online), 0305-1048 (print).
  • Reddy, P. V., Puri, R. V., Khera, A., & Tyagi, A.K.  (2012). Iron storage proteins are essential for the survival and pathogenesis of mycobacterium tuberculosis in THP-1 macrophages and the guinea Pig Model of Infection.  Journal of Bacteriology, 194, 567-575. ISSN: 0021-9193 (print), 1098-5530 (online),
  • Saini, V., Raghuvanshi, S., Khurana, J. P., Ahmed, N., Hasnain, S. E., Tyagi, A. K., & Tyagi, A. K. (2012). Massive gene acquisitions in Mycobacterium indicuspranii provide a perspective on mycobacterial evolution. Nucleic Acids Research, 40, 10832-10850. ISSN: 1362-4962 (online), 0305-1048 (print).
  • Reddy, P. V., Puri, R. V., Khera, A., & Tyagi, A. K. (2012). Iron storage proteins are essential for the survival and pathogenesis of Mycobacterium tuberculosis in THP-1 macrophages and the guinea pig model of infection. Journal of Bacteriology, 1943, 567-575. ISSN: 0021-9193 (print), 1098-5530 (online).
  • Kumar, K., Rana, J., Sreejith, R., Gabrani, R., Sharma, S. K., Gupta, A., Chaudhary, V.K., & Gupta, S. (2012).  Intraviral protein interactions of Chandipura virus. Archives of Virology, 157, 1949-1957. ISSN: 0304-8608.
  • Surolia, R., & Ghosh, P.C. (2012). Preparation and characterization of monensin loaded PLGA nanoparticles: in vitro anti-malarial activity against Plasmodium falciparum.  Journal of Biomedical Nanotechnology, 8, 1-10. ISSN: 550-7033 (print), 1550-7041 (web).
  • Bhat, P., Gnanasundram, S. V., Mani, P., Sarkar, D.P., & Das, S. (2012). Targeting ribosome assembly on the HCV RNA using a small RNA molecule. RNA Biology, 9, 1-10. ISSN: 1555-8584 (online), 1547-6286 (print).
  • Kishore, D., Kundu, S., & Kayastha, A.M. (2012). Thermal, chemical and pH induced denaturation of a multimeric b-galactosidase reveals multiple unfolding pathways. PLoS One, 7(11), e50380. ISSN: 1932-6203.
  • Arya, R., Sundd, M., & Kundu, S. (2012). Structural and functional aspects of acyl-coenzyme A binding proteins (ACBPs): a comprehensive review. Journal of Proteins and Proteomics, 3, 61-71. ISSN: 0975-8151.
  • Jangir, D.K, Dey, S.K., Kundu, S., & Mehrotra, R. (2012). Assessment of amsacrine binding with DNA using UV-visible, circular dichroism and raman spectroscopic techniques. Journal of Photochemistry and Photobiology B, 114, 38-43. ISSN: 1011-1344.
  • Mohibi, S., Gurumurthy, C.B., Nag, A., Mirza, S., Mian, Y., Quinn, M., Naramura, M., Band, H., & Band, V. (2012). Mammalian alteration/deficiency in activation 3 is essential for mouse embryonic development and cell cycle progression. Journal of Biological Chemistry, 287, 29442-29456. ISSN: ‎0021-9258 (print), 1083-351X (web).
  • Awasthi, M., Batra, J., & Kateriya, S. (2012). Disulphide bridges of phospholipase C of chlamydomonasreinhardtii modulates lipid interaction and dimer stability. PLoS One, 7(6), e39258. ISSN: 1932-6203.
  • Luck ,M., Mathes, T., Bruun, S., Fudim, R., Hagedorn, R., Nguyen, T.M., Kateriya, S., Kennis, J.T., Hildebrandt, P., & Hegemann, P. (2012). A photochromic histidine kinase rhodopsin (HKR1) that is bimodally switched by UV and blue light. Journal of Biological Chemistry, 287, 40083-40090. ISSN: ‎0021-9258 (print), 1083-351X (web).
  • Kumar, S., Kateriya, S., Singh, V.S., Tanwar, M., Agarwal, S., Singh, H., Khurana, J.P., Amla, D.V., & Tripathi, A. K. (2012). Bacteriophytochrome controls carotenoid-independent response to photodynamic stress in a non-photosynthetic rhizobacterium, Azospirillumbrasilense Sp7. Scientific Reports, 2, 872. ISSN: 2045- 2322.
  • Luck, M., Mathes, T., Bruun, S., Fudim, R., Hagedorn, R., Nguyen, T.M., Kateriya, S., Kennis, J.T., Hildebrandt, P., & Hegemann, P. (2012). A photochromic histidine kinase rhodopsin (HKR1) that is bimodally switched by UV and blue light. Journal of Biological Chemistry, 287, 40083–40090. ISSN: ‎0021-9258 (print), 1083-351X (web).
  • Penzkofer, A., Stierl, M., Hegemann, P., & Kateriya, S., (2012). Absorption and fluorescence characteristics of photo-activated adenylate cyclase nano-clusters from the amoeboflagellateNaegleriagruberi NEG-M strain. Chemical Physics, 392, 46-54. ISSN: 0301-0104.

2011

  • Jain, R., Dey, B., Khera, A., Srivastava, P., Gupta, U. D., Katoch, V. M., Ramanathan, V. D., & Tyagi, A.K.  (2011).  Over-expression of superoxide dismutase obliterates the protective effect of BCG against tuberculosis by modulating innate and adaptive immune responses.  Vaccine, 29(45), 8118– 8125.
  • Dey, B., Jain, R., Gupta, U. D., Katoch, U. D., Ramanathan, V. M., & Tyagi, A.K.  (2011).  A Booster Vaccine Expressing a Latency-Associated Antigen Augments BCG Induced Immunity and Confers Enhanced Protection against Tuberculosis.  PLoS ONE, 6(8), e23360.
  • Khare, G., Kar, R., & Tyagi, A.K.  (2011).  Identification of Inhibitors against Mycobacterium tuberculosis Thiamin Phosphate Synthase, an Important Target for the Development of Anti-TB Drugs.  PLoS ONE, 6(7), e22441.
  • Dey, B., Jain, R., Khera, A., Gupta, U. D., Katoch, V. M., Ramanathan, V. D., & Tyagi, A.K.  (2011).  Latency antigen alpha–crystalin based vaccination imparts a robust protection against TB by modulating the dynamics of pulmonary cytokines.  PLoS ONE, 6(4), e18773.
  • Khare, G., Gupta, V., Nangpal, P., Gupta, R. K., Sauter, N. K., & Tyagi, A.K.  (2011).  Ferritin Structure from Mycobacterium tuberculosis:  Comparative Study with Homologues identifies Extended C-terminus involved in Ferroxidase Activity.  PLoS ONE, 6(4), e18570.
  • Purushothaman, S., Annamalai, K., Tyagi, A.K., & Surolia, A.  (2011).  Diversity in Functional Organization of Class I and Class II Biotin Protein Ligase.  PLoS ONE, 6(3), e16850.
  • Arora, A., Chandra, N. R., Das, A., Gopal, B., Mande, S. C., Prakash, B., Ramachandran, R., Sankaranarayanan, R., Sekar, K., Suguna, K., Tyagi, A.K. & Vijayan, M.  (2011).  Structural biology of Mycobacterium tuberculosis proteins: The Indian efforts.  Tuberculosis, 91(5):456-68.
  • Tyagi, A.K., Nangpal, P., & Satchidanandam, V.  (2011). Development of vaccines against tuberculosis.  Tuberculosis,  91(5):469-78.
  • Ruchi Jain, Bappaditya Dey, Aparna Khera, Priyadarshani Srivastava, Umesh D. Gupta, V.M. Katoch, V.D. Ramanathan, Anil K. Tyagi.  (2011).  Over-expression of superoxide dismutase obliterates the protective effect of BCG against tuberculosis by modulating innate and adaptive immune responses.  Vaccine.  29: 8118– 8125.
  • Bappaditya Dey, Ruchi Jain, Umesh D. Gupta, V. M. Katoch, V. D. Ramanathan, Anil K. Tyagi.  (2011).  A Booster Vaccine Expressing a Latency-Associated Antigen Augments BCG Induced Immunity and Confers Enhanced Protection against Tuberculosis.  PLoS ONE 6(8): e23360.
  • Garima Khare, Ritika Kar, Anil K. Tyagi.  (2011).  Identification of Inhibitors against Mycobacterium tuberculosis Thiamin Phosphate Synthase, an Important Target for the Development of Anti-TB Drugs.  PLoS ONE 6(7): e22441.
  • Bappaditya Dey, Ruchi Jain, Aparna Khera, Umesh D. Gupta, V.M. Katoch, V.D. Ramanathan and Anil K. Tyagi.  (2011). Latency antigen –crystalin based vaccination imparts a robust protection against TB by modulating the dynamics of pulmonary cytokines.  PLoSONE 6(4): e18773.
  • Garima Khare, Vibha Gupta, Prachi Nangpal, Rakesh K. Gupta, Nicholas K. Sauter and Anil K. Tyagi.  (2011). Ferritin Structure from Mycobacterium tuberculosis:  Comparative Study with Homologues identifies Extended C-terminus involved in Ferroxidase Activity.  PLoSONE 6(4): e18570.
  • Ashish Arora, Nagasuma R. Chandra, Amit Das, Balasubramanian Gopal, Shekhar C. Mande, Balaji Prakash, Ravishankar Ramachandran, Rajan Sankaranarayanan, K. Sekar, Kaza Suguna, Anil K. Tyagi, Mamannamana Vijayan.  (2011).  Structural biology of Mycobacterium tuberculosis proteins: The Indian efforts, Tuberculosis, doi:10.1016/j.tube.2011.03.004.
  • Anil K. Tyagi, Prachi Nangpal, Vijaya Satchidanandam.  (2011).  Development of vaccines against tuberculosis.  Tuberculosis.  Doi:10.1016/j.tube.2011.01.003. 
  • Jatana, N., Jangid, S., Khare, G., Tyagi, A.K. & Latha, N. (2011). Molecular modeling studies of Fatty acyl-CoA synthetase (FadD13) from —a potential target for the development of antitubercular drugs. Journal of Molecular Modeling, 17(2), 301-313.
  • Tyagi, N. & Ghosh P.C. (2011). Folate receptor mediated targeted delivery of ricin entrapped into stearically stabilized liposomes to human epidermoid carcinoma (KB) cells: effect of monensin intercalated into folate-tagged liposomes.  European Journal of Pharmaceutical Sciences, 43(4), 343-353.
  • Tyagi, N., Rathore, S. S. & Ghosh P.C. (2011). Enhanced killing of human epidermoid carcinoma (KB) cells by ricin encapsulated into stearically stabilized liposomes in combination with monensin. Drug Delivery,18(6), 394-404.
  • Hasan, G. M., Garg, N., Dogra, E., Surolia, R. & Ghosh P.C.  (2011). Inhibition of the growth of Plasmodium falciparum in culture by stearylamine-phosphatidylcholine liposomes. Journal of Parasitology Research, 2011:120462.
  • Kapoor, A., Shandilya, M., & Kundu, S. (2011). Structural insight of dopamine b-hydroxylase, a drug target for complex traits, and functional significance of exonic single nucleotide polymorphisms. PLoS ONE, 6(10), e26509.
  • Jangir, D.K., Charak, S., Mehrotra, R., & Kundu, S. (2011). FTIR and circular dichroism spectroscopic study of interaction of 5-fluorouracil with DNA. Journal of Photochemistry and Photobiology B, 105(2), 143-148.
  • Oshtrakh, M.I., Berkovsky, A.L., Kumar, A., Kundu, S., Vinogradov, A.V., Konstantinova, T.S., & Semionkin, V.A. (2011). Heme iron states in various oxyhemoglobins probed using Mossbauer spectroscopy with a high velocity resolution.   Biometals, 24(3), 501-512.
  • Bisht, N.K., Abbruzzetti, S., Uppal, S., Bruno, S., Spyrakis, F., Mozzarelli, A., Viappiani, C., & Kundu, S. (2011). Ligand migration and hexacoordination in type 1 non symbiotic rice hemoglobin. Biochimica et Biophysica Acta, 1814(8), 1042-1053.
  • Oshtrakh, M.I., Kumar, A., Kundu, S., Berkovsky, A.L., & Semionkin, V.A. (2011). Study of human, rabbit and pig oxyhemoglobins using high velocity resolution Mössbauer spectroscopy in relation to their structural and functional variations. Journal of Molecular Structure, 993(1), 292-296.
  • John, R., Chand, V., Jaiswal, N. & Nag, A. (2011) Genotoxic Stress Induced Posttranslational Modification of Transcriptional Adaptor Protein Ada3. Journal of Proteins and Proteomics, 2(2), 71-79.
  • Barwal, I., Ranjan, P., Kateriya, S. & Yadav, S. C. (2011). Cellular oxido-reductive proteins of Chlamydomonas reinhardtii control the biosynthesis of silver nanoparticles. Journal of Nanobiotechnology, 9, 56.
  • Awasthi, M. & Kateriya, S. (2011). Functional diversity and optogenetic potentials of microbial rhodopsins. Journal of Proteins and Proteomics, 2(2), 115-123.
  • Penzkofer, A., Stierl, M., Hegemann, P. & Kateriya, S. (2011). Thermal protein unfolding in photo-activated adenylate cyclase nano-clusters from the amoeboflagellate Naegleria gruberi NEG-M strain.  Journal of Photochemistry and Photobiology A: Chemistry, 225(1), 42-51.
  • Penzkofer, A., Stierl, M., Hegemann, P. & Kateriya, S. (2011). Photo-dynamics of the BLUF domain containing soluble adenylate cyclase (nPAC) from the amoeboflagellate Naegleria gruberi NEG-M strain. Chemical Physics, 387(1-3), 25-28.   
  • Veetil, S. K., Mittal, C., Ranjan, P. & Kateriya, S. (2011) A conserved isoleucine in the LOV1 domain of a novel phototropin from the marine alga Osterococcus tauri modulatesthe dark state recovery of the domain. Biochimica et Biophysica Acta,  1810(7), 675- 682.
  • Indu Barwal, Peeyush Ranjan, Suneel Kateriya and Subhash Chandra Yadav. Cellular oxido-reductive proteins of Chlamydomonas reinhardtii control the biosynthesis of silver nanoparticles. J. of Nanobiotechno. 9: 56 (2011).
  • Mayanka Awasthi and Suneel Kateriya. Functional diversity and optogenetic potentials of microbial rhodopsins. J. Prot. and Proteom. 2(2) 115-123 (2011).

2010

  • Vibha Gupta, Rakesh K. Gupta, Garima Khare, Dinakar M. Salunke, Avadhesha Surolia and Anil K. Tyagi.  (2010).  Structural ordering of disordered ligand-binding loops of biotin protein ligase into active conformations as a consequence of dehydration.  PloS ONE 5(2): e9222.
  • Bappaditya Dey, Ruchi Jain, Aparna Khera, Vivek Rao, Neeraj Dhar, Umesh D. Gupta, V.M. Katoch, V.D. Ramanathan and Anil K. Tyagi.  (2010).  Boosting with a DNA vaccine expressing ESAT-6 (DNAE6) obliterates the protection imparted by recombinant BCG (rBCGE6) against aerosol M.tuberculosis infection in guinea pigs.  Vaccine.  28: 63-70.
  • Gupta, A. K., Reddy, V. P., Lavania, M., Chauhan, D. S., Venkatesan, K., Sharma, V. D., Tyagi, A.K. & Katoch, V. M. (2010). jefA (Rv2459), a drug efflux gene in Mycobacterium tuberculosis confers resistance to isoniazid & ethambutol.  Indian Journal of Medical Research, 132, 176-188.
  • Gupta, V., Gupta, R. K., Khare, G., Salunke, D. M., Surolia, A., & Tyagi, A.K.  (2010).  Structural ordering of disordered ligand-binding loops of biotin protein ligase into active conformations as a consequence of dehydration.  PloS ONE, 5(2), e9222.
  • Dey, B., Jain, R., Khera, A., Rao, V., Dhar, N., Gupta, U. D., Katoch, V. M., Ramanathan, V. D. & Tyagi, A.K.  (2010).  Boosting with a DNA vaccine expressing ESAT-6 (DNAE6) obliterates the protection imparted by recombinant BCG (rBCGE6) against aerosol M. tuberculosis infection in guinea pigs.  Vaccine, 28(1), 63-70.
  • Sharma, N. R., Mani, P., Nandwani, N., Mishra, R., Rana, A. & Sarkar, D.P. (2010) Reciprocal regulation of AKT and MAP Kinase dictates virus-host cell fusion. Journal of Virology, 84(9), 4366-4382.
  • Kumar, S.B., Venkateshwaran, K. and Kundu, S. (2010) “Alternative Conformational Model of a Seed Protein DeK1 for Better Understanding of Structure-Function Relationship”  J. Prot. Proteomics 1, 77-90.
  • Oshtrakh, M.I., Berkovsky, A.L., Kumar, A., Kundu, S., Vinogradov, A.V., Konstantinova, T.S. and Semionkin, V.A. (2010) “57Fe Quadrupole Splitting and Isomer Shift in Various Oxyhemoglobins: Study Using Mössbauer Spectroscopy”. Hyp. Interact. 197, 301-307.
  • Lawit, S.J., Wych, H.M., Xu, D., Kundu, S. and Tomes, D. (2010) “Maize DELLA Proteins dwarf plant8 and dwarf plant9 as Modulators of Plant Development”. Plant Cell Physiol. 51, 1854-1868.
  • Yadav, S.C., Jagannadham, M.V. and Kundu, S (2010) “Equilibrium Unfolding of Kinetically Stable Serine Protease Milin: Presence of Various Active and Inactive Dimeric Intermediates”. Eur  Biophys. J.   39, 1385-1396.
  • Jangir, D.K., Tyagi, G., Mehrotra, R., and Kundu, S. (2010) “Carboplatin interaction with calf-thymus DNA: A FTIR spectroscopic approach”. J. Mol. Struc. 969, 126-129. 

2009

  • Khare, G., Gupta, V., Gupta, R.K., Gupta, R, Bhat, R. and Anil K. Tyagi.  (2009).  Dissecting the role of critical residues and substrate preferene of a fatty Acyl-CoA synthetase (FadD13) of Mycobacterium tuberculosis.  PLoS ONE 4(12): e8387.
  • Vibha Gupta, Rakesh K. Gupta, Garima Khare, Dinakar M. Salunke and Anil K. Tyagi.  (2009).  Crystal structure of Bfr A from Mycobacterium tuberculosis: Incorporation of selenomethionine results in cleavage and demetallation of Haem.  PLoS One.  4(11): e8028.
  • Preeti Sachdeva, Richa Misra, Anil K. Tyagi and Yogendra Singh.  2009.  The sigma factors of Mycobacterium tuberculosis: regulation of the regulators.  FEBS Journal. Doi:10.1111/j.1742-4658.2009.07479.
  • C.M. Santosh Kumar, Garima Khare, C.V. Srikanth, Anil K. Tyagi, Abhijit A. Sardesai and Shekhar C. Mande.  (2009).  Facilitated oligomericzation of mycobacterial GroEL: Evidence for phosphorylation-mediated oligomerization.  J. Bacteriol.  191: 6525-6538.
  • Vikram Saini, S. Raghuvanshi, G.P. Talwar, N. Ahmed, J.P.  Khurana, S.E. Hasnain, Akhilesh K. Tyagi, and Anil K. Tyagi. (2009). Polyphasic Taxonomic Analysis Establishes Mycobacterium indicus pranii as a Distinct Species. PLoS ONE 4(7): e6263.
  • D. Basu, Garima Khare, S. Singh, Anil K. Tyagi, S. Khosla, S.C. Mande.  (2009).  A novel nucleoid-associated protein of Mycobacterium tuberculosis is a sequence homolog of GrotL.  Nucleic Acids Res.  Doi:10.1093/nar/gkp502.
  • Pooja Arora, Aneesh Goyal, Vivek T. Natarajan, Eerappa Rajakumara, Priyanka Verma, Radhika Gupta, Malikmohamed Yousuf, Omkita A. Trivedi, Debasisa Mohanty, Anil Tyagi, Rajan Sankaranarayanan and Rajesh S. Gokhale.  (2009).  Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis.  Nature Chemical Biology.  5, 166-173.
  • Khare, G., Gupta, V., Gupta, R.K., Gupta, R., Bhat, R., & Tyagi, A.K.  (2009). Dissecting the role of critical residues and substrate preference of a fatty Acyl-CoA synthetase (FadD13) of Mycobacterium tuberculosis.  PLoS ONE, 4(12), e8387.
  • Gupta, V., Gupta, R. K., Khare, G., Salunke, D. M., & Tyagi, A.K.  (2009).  Crystal structure of Bfr A from Mycobacterium tuberculosis: Incorporation of selenomethionine results in cleavage and demetallation of Haem.  PLoS ONE, 4(11), e8028.
  • Sachdeva, P., Misra, R., Tyagi, A.K., & Singh, Y.  (2009). The sigma factors of Mycobacterium tuberculosis: regulation of the regulators.  Federation of European Biochemical Societies Journal, 277(3):605-26.
  • Kumar, C. M. S., Khare, G., Srikanth, C. V., Tyagi, A.K., Sardesai, A. A., &Mande, S. C. (2009). Facilitated oligomericzation of mycobacterial GroEL: Evidence for phosphorylation-mediated oligomerization.  Journal of Bacteriology, 191(21), 6525-6538.
  • Saini, V., Raghuvanshi, S., Talwar, G. P., Ahmed, A., Khurana, J. P., Hasnain, S. E., Tyagi, A. K., & Tyagi, A.K.  (2009).  Polyphasic Taxonomic Analysis Establishes Mycobacterium indicus pranii as a Distinct Species. PLoS ONE, 4(7), e6263.
  • Basu, D., Khare, G., Singh, S., Tyagi, A.K., Khosla, S., & Mande, S. C.  (2009).  A novel nucleoid-associated protein of Mycobacterium tuberculosis is a sequence homolog of GroEL.  Nucleic Acids Research, 37(15):4944-54.
  • Arora, P., Goyal, A., Natarajan, V. T., Rajakumara, E., Verma, P., Gupta, R., Yousuf, M., Trivedi, O. A., Mohanty, D., Tyagi, A.K., Sankaranarayanan, R., &Gokhale, R.S.  (2009).  Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis.  Nature Chemical Biology, 5(3), 166-173.
  • Gupta, A., Chaudhary, V. K. & Bhat, R. (2009). Directed evolution of an anti-human red blood cell antibody. MAbs, 1(3), 268-280.
  • Krishnan, A., Verma, S. K., Mani, P., Gupta, R., Kundu S. & Sarkar D.P. (2009) A histidine switch in hemagglutinin-neuraminidase triggers paramyxovirus-cell membrane fusion. Journal of Virology, 83 (4),1727-1741.
  • Kohaar, I., Hussain, S., Thakur, N., Tiwari, P., Nasare, V., Batra, S., Singh, V., Bhambani, S., Das, B.C., Sarkar, D.P. & Bharadwaj, M. (2009) Association between HLA Class II alleles with HPV mediated Cervical Cancer in Indian women, Human Immunology, 70 (4), 222-229.
  • Subramanian, N., Mani, P., Roy, S., Sarkar, D.P., & Das, S. (2009) Targeted delivery of hepatitis C virus specific shRNA in mouse liver using Sendai virosomes. Journal of General Virology, 90(8), 1812-1819.
  • Wang, X., Sarkar, D.P., Mani, P., Steer, C. J., Chen, Y., Guha, C., Chandrasekhar, V., Chaudhuri, A., Roy-Chowdhury, N., Kren, Betsy T. & Roy-Chowdhury, J. (2009) Long-term reduction of jaundice in Gunn rats by non-viral liver-targeted delivery of Sleeping Beauty transposon. Hepatology, 50 (3), 815-824.
  • Kohaar, I., Hussain, S., Thakur, N., Tiwari, P., Nasare, V., Batra, S., Singh, V., Bhambani, S., Das, B.C., Sarkar, Debi P., Bharadwaj, M. Association between HLA Class II alleles with HPV mediated Cervical Cancer in Indian women, Human Immunology, 70: 222-229, 2009.
  • Subramanian, N., Mani, P., Roy, S., Sarkar, Debi P., and Das, S. Targeted delivery of hepatitis C virus specific shRNA in mouse liver using Sendai virosomes. Journal of General Virology, 90: 1812-1819, 2009.
  • Yadav, S.C., Jagannadham, M.V., Kundu, S., and Jagannadham, M.V. (2009) “A kinetically stable plant subtilase with unique peptide mass fingerprints and dimerization properties”. Biophys. Chem. 139, 13-23.
  • Krishnan, A., Verma, S.K., Mani, P., Gupta, R., Kundu, S., and Sarkar, D.P. (2009) “A histidine switch in hemagglutinin-neuraminidase triggers paramyxovirus-cell membrane fusion”.  J. Virol. 83, 1727-1741.
  • Kumar, M.R., Pervitsky, D., Chen, L., Poulos, T., Kundu, S., Hargrove, M.S., Rivera, E.J., Diaz, A., Colón, J.L., Farmer, P.J. (2009) “Nitrosyl hydride (HNO) as an O2 analogue: long-lived HNO adducts of ferrous globins”. Biochemistry 48, 5018-5025.
  • Smagghe, B.J., Hoy, J.A., Percifield, R., Kundu, S., Hargrove, M.S., Sarath, G., Hilbert, J.-L., Watts, R.A., Dennis, E.S., Peacock, W.J., Dewilde, S., Moens, L., Blouin, G.C., Olson, J.S., and Appleby, C.A (2009) “Correlations between oxygen affinity and sequence classifications of plant hemoglobins”. Biopolymers 91, 1083-1096.

2008

  • Ruchi Jain, Bappaditya Dey, Neeraj Dhar, Vivek Rao, Ramandeep Singh, Umesh D. Gupta, V.M. Katoch, V.D. Ramanathan and Anil K. Tyagi.  (2008).  Enhanced and Enduring Protection against Tuberculosis by Recombinant BCG-Ag85C and its Association with Modulation of Cytokine Profile in Lung.  PLoS ONE.  3(12): 3869.
  • Mohd Akif, Garima Khare, Anil K. Tyagi, Shekhar C. Mande, and Abhijit A. Sardesai (2008). Functional Studies on Multiple Thioredoxins from Mycobacterium tuberculosis.  J. Bacteriol. 190: 7087-7095.
  • Shruti Jain, Garima Khare, Pushplata Tripathi and Anil K. Tyagi.  (2008).  An inducible system for the identification of target genes for a regulator in mycobacteria.  American Journal of Biochemistry and Biotechnology 4(3): 226-230.
  • Farhana, A.,  Kumar, S., Rathore, S. S.,  Ghosh, P.C., Ehtesham, N.Z.,  Tyagi, A.K. and Hasnanin, S.E. (2008) Mechanistic insights into a Novel Export-Import System of Mycobacterium tuberculosis unravel its role in trafficking of iron. PLoSOne. 3, e2087.
  • Rathore, S.S. and Ghosh, P.C. (2008) Effect of surface charges and density of distearylphosphatidylamine-mPEG-2000 (DSPE-mPEG-2000) on the cytotoxicity of liposome entrapped ricin: Effect of lysosomotropic agents. Int. J. Pharm. 350, 79-94.
  • Surolia, I., Sarkar, Debi P., and Sinha, S. Form and dimensions of aggregates dictate cytotoxicities of Danish dementia peptides. Biochim. Biophys. Res. Commun., 372: 62-66, 2008.
  • Surolia, I., Chhiber, M., Sarkar, Debi P., and Sinha, S. Fibrillogenesis in Adan peptides is inhibited by biphenyl ethers. Biochim. Biophys. Res. Commun., 370: 681-686, 2008.
  • Surolia. I., Sinha, S., Sarkar, Debi P., Reddy, P. Y., Reddy G. B., and Surolia A. Concurrence of Danish dementia and cataract: Insights from the interactions of dementia associated peptides with eye lens a-Crystallin. PloS One, 3, e2927, 2008.
  • Mishra S, Talukder, I., Singarapu, N., Sindhu, K.V., Kateriya, S., Goswami, S.K. WD-40 repeat protein SG2NA has multiple splice variants with tissue restricted and growth responsive properties. Gene. 420: 48-56, (2008).
  • Ernst, O.P., Sánchez Murcia, P.A., Daldrop, P., Tsunoda, S.P., Kateriya, S., Hegemann P. Photoactivation of channel rhodopsin. J Biol Chem. 28:1637-43, (2008).

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